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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9106028, gi|1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILAAVDAGD DMDDMKPEQR HVLQRCWVDV LSVTRHATCL RYLGFPALLP SAVALLLGCL  60
   61 AALTLPRLPP VWVLWIFLFA GVMLAVVVRR VAWCGVVLFG FANCCLHGQF GLRHQLSFAL 120
  121 EGRDLVLRGR IVSLPVPETR RTRFLLRVDT DQDQEPALRG RLLQLSWYDE NKVVAPGPRN 180
  181 ALHAGSVWQL HVRLRAPHSL LNPGGFDSER YALAQGIVAT GYVRAPTMAR EVAAATGINA 240
  241 WRERMSVRIA DAVLSEASVY LRALALGDTR GLSQQDWEVL RATGLTHLIA ISGFHVGMVA 300
  301 GACALLVSLL WRLFPHLAWR CPRPLAMALI AVPAAAGYTV LAGASLPTVR TALMIGIVAL 360
  361 ARLTRRRAMP GHVLGLALLV VLVWDPLAIL SAGFWLSFAG VAWLLWCMQD GHAAPWRGFL 420
  421 SAQGVATLGL LPFTVALFGQ VSFVGPFANL IAIPLWTFVV VPLALLGTAL EALVPGWGSP 480
  481 MWRLGGTCFE WSWQLFEYLA QTDFALWWLP ESDGVALWLA LLGAFWLLLP RGTPGKWLAL 540
  541 LLWLPLLWPE RERPRPGEFE MQMLDVGQGL SIVVRTSGHT LLYDAGPAVN DGFDAGERVV 600
  601 VPALRASGIR RLDALVASHA DSDHVGGLPA VLKAYPVDIS YAPPDAPLDV ERRCSAGDSW 660
  661 LWDGVQFRFL HPAPHSTYLG NESSCVLRID TRWGSALLTG DIGKVVERGL LSQDRESVRA 720
  721 DVVVVPHHGS AGSSSLGFVR AVNARLALVS SGDGNRFGHP RCSVVESWSE TADVLLTAHS 780
  781 GAVRIWVGQQ GLQLRERRVW RRRFWDAVER RRSAAILSAT EDVSKERRRN ETCWNW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle