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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51975199, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKINLQMQ NISFVLIIAL AVWLKTYLIT RFSFDLKIES STQELILFIS PLAASLAFVG  60
   61 LALFATGEKR NYIALCINFL LTIVLVGNVM FYDFYSDFVT LPVLGQTSNF GQLGGSIIEI 120
  121 LNYKIILAFA DIIFFFILLK KKALVFQTGR VTHSARLLYF LLTIGVFFAN LHLAEKERPE 180
  181 LLTRSFDRVM LVKNLGLYTH QVYDLTLQVK AGSQKALADS SKLQETENYV KANQSEPNPN 240
  241 MFGAAKGKNV IVVTLESLQT FLIGASVNGQ EVTPFLNEFI NESYYFNNFF HQTGQGKTSD 300
  301 SEFLIDTSLY PLNRGAVFFT HGNNDYTATP EILRQQGYFT SVFHANNATF WNRNIMYSAL 360
  361 GYDRYYNELD YKITPETNLN WGLKDIEYFD QSVDILKTVD QPFYARFLTL TNHYPFTYDE 420
  421 DTKFIEPYNS GNGVFDRYIV TARYLDESIK KFIERLKAEG MYDDSIIVLY GDHYGISEKH 480
  481 NRAMAQFLEK DQITEFDTLN LQRTPLYIHM PGQTEGETIS KPTGQIDIKP TILNLLGIDT 540
  541 TNDIRFGHDM FSNEYTGFVV LRDGSFITDK YAYKNNIFYD RITGEIVDLP KNEAQALIKR 600
  601 AQNELRMSDK IIEGDLLRFS ESNKIKTGEV QTKIKETEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle