YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52142602, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKKFKVLSF ALAISLFLFG CEKSTASSKK EDVTVQIGIQ QGLSPLLLAQ KKGWFEEEFK  60
   61 KEGVKVKWTE FQSGPPYFEA IASNRLDFGE VGNSPVISAQ AAGIEFTEIA NTSYARKGTG 120
  121 ILVQKDSKIT SVKELKGKKI AVAKGSSAFN LLYRALDKEG IDAKDVNVIQ LQPDEAQPAF 180
  181 ESGSVDAWAI WDPFISLHTV NKGAKVITDG EILNVSSPEF LIARTKFAKE HPELVEKFLK 240
  241 VYEKARVWQD ENLDEAIKIY TSAKKIDADI VKEVFNHDKP ILVPVTKEIV AEQQQTADFQ 300
  301 YKLGSIKKEI KTDKVVDNSF VEKALKAK

Type	Start	End	Confidence
Signal Peptide	1	26	0.98
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	328	0.99