YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49481196, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKAFKIKRV VFVLIAIAAV AIGYFMFQSI TSPAKAVAKQ ENVVQLASEQ PKVEMNKTAP  60
   61 SRFNGKERKV AYLTFDDGPG KYTAELLNTL KQHDAKATFF LIGANVKEFP DLVKRENAEG 120
  121 HYVGMHSMTH NFAKLYKNGE YVNEMKEDQS LIANIIGKSP KLTRPPYGSM PGLNEGLRNK 180
  181 VVEGGFKVWD WTIDSLDWKY NKMQVDAAAA QIAQNVLTNA TKPQEVILMH DIHPQSVAAV 240
  241 PAILKGLKEK GYEFEAYHEE SHFPVNFWHD NRM

Type	Start	End	Confidence
Cytoplasmic	1	9	0.65
Transmembrane Helix	10	27	0.72
Non-Cytoplasmic	28	273	0.99