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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52143605, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVISNVLA VTVALQVVMA PATSFASTKE FPDVPKNHWA LEAINDLTSK GVIAGYDNGK  60
   61 FGFGDVVTRE QVAALMYRAL KPEVKSDYKN PYSDISAGTT MFQKEILALT DMGIFVGDGK 120
  121 GTFRPKESLT RAEMSVILQK AFKLEVKAPH TFDDIDATYW WAKEAISALQ SNGVAAGNGL 180
  181 GGFDPSGVLT REGYAQLLYK AMQIKKDVPV EQPSYMNLDV TLPSNITAQE IDGFIKEWHP 240
  241 DSPLIGTGQD FIQAQNEYGV SALYLAAHAI LESGYGKSEI AYRKHNLFGL RAYDRDPFAY 300
  301 AKYLPSYKDS ISYNADYVRK NYLEKGADHF NGYTLPAMNI KYATDKEWAG KIANLMERIK 360
  361 PFNKKDYENV KRLPKNPNTL NVEALGKEIP YKDYAKDATA TVQLVGSYYQ VPYPFGYTIK 420
  421 SVPNITQNEV GKLESGKKVN VYREDPNGWV EFSFENAQEK YWTLKKNLKI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle