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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51977903, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTNSYKKV IAGTMTAAMV AGVVSPVAAA GKSFPDVPAG HWAEGSINYL VDKGAITGKP  60
   61 DGTYGPTETI DRSSAAVIFT KILNLPVDDN AQPSFKDAKN TWAAKYIAAV EKAGIVKGDG 120
  121 KENFYPEGKI DRASFASMLV SAYNLKDKVN GELVTTFEDL LDHWGEEKAN ILINLGISVG 180
  181 TGGKWEPNKT VTRAEAAQFI ALTDKKYGKK DNEQAYVTDV KVSEPTKLTL TGTGLDKLSA 240
  241 DDVTLEGDKA VAIEASADGT SATVTLGGKV APNKNLTVKV KNQSFVTKFV YEVKKLAVEK 300
  301 LTFDDDRAGQ AIAFKLNDEK GNADVEYLNL ANHDVKFVAN NLDGSPANIF EGGEATSTTG 360
  361 KLGVGLSHGD YKVEVQVTKR GGLTVSNTGI ITVKNLDTPA SAIKNTVFAV DADKNGVVYG 420
  421 NKLTGKDFKL NSQTLVVGEK AQIHNVVATI AGEDKVVDPN SISIKSSNHG IISVVNNYIT 480
  481 AEAAGEATLT IKVGDVTKDV KFKVTTDSRK LVSVKANPDK LQVVQNKTLP VTFVTTDQYG 540
  541 DPFGANPAAI KEVLPKTGVV AEGGLDVVTT DSGSIGTKTI GVTGNDVGEG TVHFQNANGE 600
  601 TLGSLYVNVT EGNVAFKNFE LVSKVGQYGQ SPDTKLDLNV SNTVAYQLSK YTSDRVYSDP 660
  661 ENLEGYVVES KNPAVAEAKI VGNKVVVKGL KPGKVDIHLT KNGATAGKAT VEIVQEKIAI 720
  721 KSVNFKPVQT ENFVEKKINI GTVLELEKSN LDDIVKGINL TKETQHKVRV VKSGDDQGKL 780
  781 YLDTNGNAHF DLFDQELGYV TVSQTSDSAL PNFKTDLYDT LTTKYTDKGT LVFKVLGEKD 840
  841 VLTSEIGSQA VHVNVLNNPN L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle