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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25290734
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENTTLKLRG MSCASCASSI EDAINSVPGV NECIVNFGAE QATIEYDPRR TDLEAIQEAV  60
   61 DAAGYSAYPL QKQNLMAGDD DAEKRHRLRE SRDLMRKVAV GGIISTVLVI GSLPMMTGLH 120
  121 LPFIPVWLHN PWVQLILTTP VQFWCGYSFY INGWKALKRH AATMDTLIAL GTSAAYFYSL 180
  181 FPTLFPSFFI NQGLTPDVYY ETAAVVITLI LLGRLFENRA KGQTSEAIRK LIGLQAKTAR 240
  241 LIRNGREVDV PIEEVQIGDV ILVRPGEKIP VDGEVVDGTS TIDEGMVTGE SVPVKKQPGD 300
  301 EVIGATINKT GSFKFRATRV GSDTVLAQIV QLVQQAQGSK APIQRLADQV TGWFVPAVIA 360
  361 IALLTFIIWF NFTGNVTLAL ITTVGVLIIA CPCALGLATP TSVMVGTGKG AENGILIKGA 420
  421 ESLELAHKIQ TIVLDKTGTI TQGKPTVTDF VTVNGTANGN EIRLVQLAAS VERNSEHPLA 480
  481 EAVVRYAQSQ EVTLADVKEF EAVAGSGVQG IVSDSLVQIG TQRWMSELGI DTQALQQDKE 540
  541 RLEYLGKTAI WIAVDRQIQG LMGISDAIKP TSIQAISALQ KLGLEVVMLT GDNRRTAETI 600
  601 AREVGIKRVL AEVRPDQKAA TVQKLQSEGK IVAMVGDGIN DAPALAQADV GMAIGTGTDV 660
  661 AIAASDITLI SGDLRSIVTA IQLSRATIRN IRQNLFFAFI YNVAGIPIAA GILFPIFGWL 720
  721 LNPIIAGAAM AFSSVSVVTN ALRLRKFQAK PVA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle