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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4539560, gi|2...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRAEQPTAP HPAPDDALVA DSRERAVRAL LRRPQLRRLW SAQLVGGVGD ILALLVLVLL  60
   61 TVQAAIGAGS FGGGYRGVAF AVATVFGVRI LATLLFGAVL LGPLTSLTSQ DGPLDRRWTM 120
  121 VGADGLRAAL LIVAPLWIDW TPDDALAYLL VTAFVTGVAE RFWTVCRESA APALLPAPPL 180
  181 EGATVRPLPD HMDALRRLSL RTSFVAIPLA AAVLVVAGLL NNLLGAGVDW FAEHQAALGS 240
  241 YVAAGLFAAS LSVVSILELP AMRTPRPWSP LEGLRRPRSG GGVDKGRTGA LPLLVCACAA 300
  301 VAAVVAATVA VAVLHAKDLG GGPVLYGLTA GALTGGGVVG IRTAPALLPS LSRRRLLALA 360
  361 IAFVGVTLLA AGLVPDDTTV LLLLALSGVG AGVAANTGHA LLDQETEDHR RARTTEHLHA 420
  421 VVRVCVALGA VVGPVLAAAI GPHRLENGRF VFAHGGAAFV LMLLGALLLP LAALVLAKVD 480
  481 DRSGVPLRHD LRDALLGGDD PVPTSAATGF FIALEGGDGA GKSTQAEALA EWIRGKGHEV 540
  541 VLTREPGATP VGKRLRSILL DVSSAGLSHR AEALLYAADR AEHVDTVVRP ALERGAVVVS 600
  601 DRYIDSSVAY QGAGRDLSPT EIARINRWAT NGLVPHLTVL LDVAPEAARE RFTEAPDRLE 660
  661 SEPAEFHARV RSGFLTLAAA DPGRYLVVDA GQEPEAVTTV VRHRLDQVLP LSEAEIKARE 720
  721 EARRKAEEEA RRKAEEEAAR KAEEERLERE RLEEEARVRA EEEERKRREL EEAQRREAER 780
  781 QAEEARQRAE EARRKAEEER ARLLAEEKAR AEEEARLRAE QERRRKQAEE EERLRAEADA 840
  841 RRLEKQRKAE EALLRAEEAR RAAEQAAAAA AAAAGPKSAA PAAADAPRPK PAASAPTDAA 900
  901 TVPTPIVTPT NASGGPVEDT AVLRPVRDTP DDDRTDDAEG GTDARGARGD GGRASGESES 960
  961 EVTTELPKPP VPSGAADETA VLPAVQPRDA DETAVLPPVR GDDPADRVPP GYFREESPAE1020
 1021 EAQDRTRELP QIDPDQAPPS RRRRSDWAEE TPLDDLPTLA DELLGPHDED EGGRDDEGRG1080
 1081 GRGRGRGRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle