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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17227588, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLHWLLSGT VGTVLLLSSP ALATRLNSWR FDANQNRLEI NTTGAVQPRA QLIFNPTRLV  60
   61 IDLPNVTFGR SQLTQPIGGR IRSVRVGQFD PQTTRIVVEV APGYTLDPQQ IKFVGLTANR 120
  121 WTVQLPTPTS EQAESSPDNT YNVVTIDSNT RPSLPNNTRP ELPNNTRPEF SDNTISAAPG 180
  181 TTQIEGLQVT GDGFFVRTSG GNPQVQVIRS RDRATIFMDI AGATLSPRAP RNIPVNKHGV 240
  241 NRVELTPLQT RTPSVRMTLR VDKNSPDWRA TNSNAGGLVV LPSRVVRLPN NDNGEGNTST 300
  301 LPDRITTTSA IATIQSVDLS SNGTQLLIRA DQAVSGNGGW DRNTGLFRIT IPNAQLAPQV 360
  361 TGPSLSANSP ILRIRLQKQE PNTVVVLVQP AAGVQVGQLN KVGNQLLALQ LQGSRRLATT 420
  421 PPLPPIQGQL PDPTNPRPLP QPGTRPVPKG RLSVFIDPGH GGKDPGAIGI GGVREKDIIL 480
  481 PISQRIAQVL QQNGVQVVMA RNSDFFVSLP GRVQMAERAR ADVFVSIHAN AIGGNRADVN 540
  541 GLETYYYDSG LGLARAVHRS ILQNVNVRDR GVRRARFYVL RKSSMPSILV ETGYLTGRDD 600
  601 NGKLQSPAYQ RQMADAIARG ILQYLKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle