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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17232007, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIYANNLGI RVSFLPGDSV ITQRYAQDME TNYSDKAYRW NRENYSSKRR FVDIWSFVLT  60
   61 LMFKLWRYNK SWSYPGGVTE AKQAARRKAQ AVWIRNTLLD LGPTFIKVGQ LFSTRADIFP 120
  121 GEYVEELAKL QDKVPAFGYE QVEKIVEQEL GKKIPELFHS FEPIPLAAAS LGQVHKAVLH 180
  181 SGESVVVKVQ RPGLKKLFEI DLQILKGIAR YFQSHPKWGR GRDWMGIYEE CCRILWEEID 240
  241 YLNEGRNADT FRRNFRGYDW VKVPKVYWRY ASPRVLTLEY LPGIKISQYE AIEAAGLDRK 300
  301 VLARQGAQAY LLQLLNNGFF HADPHPGNIA VSADGALIFY DFGMMGQIKS NIREGLMQTL 360
  361 FGIAQKDGDR VVQSLIDLGA IAPVDDMGPV RRSVQYMLDN FMDKPFENQS VAAISDDLYE 420
  421 IAYNQPFRFP ATFTFVMRAF STLEGVGKGL DPEFNFMEVA QPYAMQLMTD MNGSDSNSFL 480
  481 NELSRQAVQV STTAFGLPRR LEDTLEKLER GDMRLRVRSI ESERLLRRQG NIQIGIGYAL 540
  541 IISGFTLSAT ILLVNHYVWL ALLAGLIAAA VSVILIRLLL RLDRYDRMY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle