YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29610380, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRIPFGDWV NDTVDWLLNH MSWLFDFFKT VFLGAFDGID AVLQAPQPLL LAGILAVIAF  60
   61 WLRGTSAGVL TFVGFAFIDS LELWEDAMVT LSLVLVATVI ALVVSVPVGI WAARSDRVSS 120
  121 IVRPVLDFMQ TLPAMIYLIP AILFFGTGAP AGIVATLIFA LAPGVRMTEL GIRQVDKELV 180
  181 EAADAFGTTP RNILLRVQLP LALPTVMAGV NQVIMLGLSM AAIAGMVGTG GLGGDVNEAI 240
  241 GQLNVGLGSE AGVAIVILAI YLDRMTSALG TQVSPLGRRA AAKLRAAQGL KIWSYRPRAA 300
  301 VAVVGVVVLA LVAGGMGIFG GTTSSTAASD AENVGQGKKV TIGYIPWDEG VASTFLWQEV 360
  361 LEQRGFQVDT KQFDAGPLYT SLGQGDIDFQ TDSWLPTTHA QYWKKYGKQL DDLGSWYGPT 420
  421 SLELSVPSYM KGVDSLADLK GQASKFGGKI TGIESSAGMM GLLKTKVLKE YGLDKEYKVV 480
  481 DSSTPAMLAE LKRAYAKKDP VVVTLWSPHW AYSDYDLKKL KDPKGAWGKG DGVHTLARKG 540
  541 FAQDNPVVGR WLKNFKMTEK QLTGLEAEIN KAGKGKQQDA VRSWLKRNPG VVDKLAPVKS 600
  601 ATSGAAGETK RPLDVAWFPW DEDVAVTYLW KNVLARRGYT LNLKQMDVGP VYTGLASGDL 660
  661 DLNFDAWLPY AQKNYWDQHK NDLRDLGTWY KPTSLEIAVP SYVKDVKSLA DLKGKGGTFD 720
  721 GKIIGIEPGT GEMNLLKTKV LPGYGLDKEY KVVDGSTPAM LAELKRAYAK KEPVAVVLWS 780
  781 PHWAYSEYKL TKLADDKKLF GEGNTIRTIS SKQFPERYPQ LTKWIKDFRM SEAELGSLES 840
  841 EIKKRGQGHE QDAVAAWLKE HPDMVGRMTP Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle