YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27364610, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKANNAETPD SSNAADTFKW VTTFVLLAAA VVGNYLYGEL SVVIRAAGVV VLIAAALGVA  60
   61 ATTTKGKEAI VFAKESRMEV RKVVWPTRQE TMQTTLIVLA VSIVMALVLW GIDGIMVRLI 120
  121 AFATGV

Type	Start	End	Confidence
Cytoplasmic	1	16	0.89
Transmembrane Helix	17	37	0.88
Non-Cytoplasmic	38	42	0.75
Transmembrane Helix	43	64	0.90
Cytoplasmic	65	93	0.85
Transmembrane Helix	94	116	0.87
Non-Cytoplasmic	117	126	0.80