YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33989505
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMSRSVPLL LLVLCGATDF AGACSCSPEH PQQAYCNADV VIRAKVVGRK EVVTGNDAYG  60
   61 YPIKMIRYDV KQLKMFKGPN GEIDTIFTGP SSALCGVSLE SNGKQEYLIT GNLNSNGTLR 120
  121 INLCDYIESW ESLSLTQKKS LGPRYQMGCD CKIVQCPIIP CSISEPVECL WTDWVLEGTV 180
  181 QGTQAQHYTC VKRSDSSCAW YRGSTPPKKE FMDIEEP

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	217	0.99