YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27367902, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTVIGAIA LMSALTVTTA SAKETISAVG SSSVTPLMEV FSETYMKKNP EVFIEVQGPG  60
   61 SSAGVKAAKN GSADLGMSSR DLKSSEKETA LVEEVIARDG IAVVVNPKNT LKGLTAEQVS 120
  121 AIYKGEVTNW KQVGGEDKPI VAITRDTASG TRGAFEDILK LKKKISGKEV SAISQRAQVA 180
  181 NGNGALKTMV ASNPYAIGYI SLGTVDESVH PLAIDGTDAS IPNVKNGSYK VARPFLVLYK 240
  241 QGKPSAETQK FLDWMLTPEA QAIVEKKGYI SVN

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	273	0.99