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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24987054, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQDRNDKTR RQFLATSTVL GAAGALWSAL PFTGQAGSAH ASTQGGSMTA DLILFNGKLH  60
   61 TVDREKPTAT AVAIKDGRFI AVGSDAEAMA HKGAASQIID LKQRTVIPGL NDSHLHLIRG 120
  121 GLNYNLELRW EGVPSVADAL RMLKDQAART PTPQWVRVVG GWNEYQFAEK RMPTLEEINQ 180
  181 AAPDTPVFLL HLYDRALLNR AALKAVGYTK ETPNPPGGEI QRDKFGNPTG MLIARPNAMI 240
  241 LYATLAKGPK LPLEYQVNST RQFMRELNRL GLTSAIDAGG GYQNFPDDYS VIQELADNDQ 300
  301 LTVRIAYNLF TQKPKEELDD FKKWTSSVKL HSGTDFLRHN GAGEMLVFSA ADFEDFLEPR 360
  361 PDLPQTMEEE LEPVVRHLVE QRWPFRLHAT YNESITRMLD VFEKVNRDIP FNGLPWFFDH 420
  421 AETITPQNIE RVRALGGGIA IQDRMAFQGE YFVDRYGAKA AEQTPPIKRM LEMGVPVGAG 480
  481 TDATRVSSYN PWTSLYWLVS GKTVGGMELY PEGLSRDTAL QLFTQGSAWF SSEQGKKGQI 540
  541 KVGQLADLAA LSLDFFSVDE EAIKGIESVL TIVDGKVVYG AGEFDKFGPP QVPVLPEWSP 600
  601 VTKVPGHWRV GTPSLAAAVH QCSGPCGVHA HSHEKARHSS VPVNDFQGFW GALGCSCFAF 660
  661 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle