YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33576215, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAMRELIKR YWDIIRRPSV HFSLGFLTVG GFVGGILFWG AFNTAMELTN TEQFCTGCHE  60
   61 MRDNVYAELK GTIHYTNRSG VRAICSDCHV PHNWTDKIAR KMQASKEVWG KIFGTINTRE 120
  121 KFVEKRLELA QHEWARLKAN DSLECRNCHN YESMDFTRQS VRAQNMHSTY LADKSKTCID 180
  181 CHKGIAHTLP RMPPDQTSLA PPAAGPAREL ARADTGHAKR

Type	Start	End	Confidence
Cytoplasmic	1	19	0.98
Transmembrane Helix	20	42	0.95
Non-Cytoplasmic	43	220	0.99