YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29468574
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTWANLGLQ DSSSPLMEQL IFFHDHALMI LVMITVLVGY LMFTLFFNNY VNRYLLHGQT  60
   61 IEIIWTILPA IILLFIAFPS LRLLYLLDEI NEPAVTLKAI GHQWYWSYEY SDFNNVEFDS 120
  121 YMIPTNELPV DGFRLLDVDN RVVLPMNSQI RILVTAADVI HSWTVPALGV KVDGTPGRLN 180
  181 QTNFLINRPG LFYGQCSEIC GANHSFMPIV IESVPVNYFI KWISNNVNS

Type	Start	End	Confidence
Cytoplasmic	1	20	0.73
Transmembrane Helix	21	46	0.84
Non-Cytoplasmic	47	62	0.62
Transmembrane Helix	63	85	0.84
Cytoplasmic	86	229	0.72