YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50934185, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASCALKPSP SPFLEQTRIR AIQPSSRPSL FRVMAKKAKK IQTSQPFGPG GGPNLKDGVD  60
   61 ASGRPIKGKG VYQFASKYGA NVDGYSPIYN PEEWSPSGDV YTGGKTGLLL WAVTLSGILL 120
  121 AGALLVYNTS ALAS

Type	Start	End	Confidence
Cytoplasmic	1	106	0.85
Transmembrane Helix	107	127	0.92
Non-Cytoplasmic	128	134	0.68