YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51963372, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGTPASSPL FGTPSTTPAF GAPSSTPAFG TPSTNPAFGT PSSTPAFGAP SSTPSFGTPS  60
   61 TAPAFGTPSS TPAFGAPSST PAFGAPFSTP AFGVAPSPSP SPFGFQQQMT PSPSPFGFAG 120
  121 GGGGQITTQM APVAPLPLSP SDRDIQAIVD AYKEDPGNPR YAFRHLLFSV TEPSQRVKPV 180
  181 AASDIMWAEA MGKLEGMDSS DRERLWPQLV QGFKDLSYRL KLQDGVLVSD SDRLSMTRDN 240
  241 VKKLQRHFQA DTYPWIQRLK QQELVIERRL LRIMRIVEAL ENRGYRIPLT KEEADLYERL 300
  301 AVIAKQLKGP TGDLHRRVYN LLSTSRLLAS AGGTAGPIYI PSSAKVDEQS VAELLEALQQ 360
  361 QTEAVAKLGN VMKRDTRDLE IILSEDTDMA EDSVGRRALK MYN

Type	Start	End	Confidence
Signal Peptide	1	21	0.91
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	403	0.99