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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37183341, gi|...
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSEVARGKR AALFFAAVAI VLGLPLWWKT TETYRASLPY SQISGLNALQ LRLMVPVTVV  60
   61 FTRESVPLDD QEKLPFTVVH EREIPLKYKM KIKCRFQKAY RRALDHEEEA LSSGSVQEAE 120
  121 AMLDEPQEQA EGSLTVYVIS EHSSLLPQDM MSYIGPKRTA VVRGIMHREA FNIIGRRIVQ 180
  181 VAQAMSLTED VLAAALADHL PEDKWSAEKR RPLKSSLGYE ITFSLLNPDP KSHDVYWDIE 240
  241 GAVRRYVQPF LNALGAAGNF SVDSQILYYA MLGVNPRFDS ASSSYYLDMH SLPHVINPVE 300
  301 SRLGSSAASL YPVLNFLLYV PELAHSPLYI QDKDGAPVAT NAFHSPRWGG IMVYNVDSKT 360
  361 YNASVLPVRV EVDMVRVMEV FLAQLRLLFG IAQPQLPPKC LLSGPTSEGL MTWELDRLLW 420
  421 ARSVENLATA TTTLTSLAQL LGKISNIVIK DDVASEVYKA VAAVQKSAEE LASGHLASAF 480
  481 VASQEAVTSS ELAFFDPSLL HLLYFPDDQK FAIYIPLFLP MAVPILLSLV KIFLETRKSW 540
  541 RKPEKTD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle