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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GH32_ORYSA
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPAAVAAAE AGSKAAAVAG KAVAACERDA EKLEFIEEMT RGFDAVQERV LAAILARNNG  60
   61 AEYLRRHGME GRTDREAFKA RVPVVTYEDL RPEIERIANG DRSNIISSHP ITEFLTSSGT 120
  121 SAGERKLMPT IEDELDRRQM LYSLLMPVMN LYVPGLDKGK GLYFLFIKSE TKTPGGLPAR 180
  181 PVLTSYYKSD HFKHRPFDPY NVYTSPTAAI LCTDAFQSMY AQMLCGLVAR AEVLRVGAVF 240
  241 ASGLLRAIRF LQLHWRELAH DIRTGTLSAK VTEPSIRDAV AEVLAAPDAE LAAFVEAECG 300
  301 KDKWEGIITR MWPNTKYLDV IVTGAMAQYI PTLKFYSGGL PMACTMYASS ECYFGLNLRP 360
  361 MCDPSEVSYT IMPNMGYFEL MPHDPDAPPL PRDAPPPRLV DLADAEVGRE YELVITTYAG 420
  421 LCRYRVGDIL QVTGFHNAAP QFRFVRRKNV LLSIDSDKTD EAELQAAVER ASALLSPYGA 480
  481 SIVEYTSQAD ATTIPGHYVV YWELMVREGG AWPPPAEEEG RGVFERCCLE MEEALNAVYR 540
  541 QGRNGEAIGP LEIRVVRAGT FEEVMDYAIS RGASINQYKA PRCVSFGPII ELLNSRVISK 600
  601 HFSPACPKYS PHKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle