YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55623560
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSAASSER FKKLHEIFRG LHEDLQGVPE QLLGTAGTEE NKSIRDFDEK QQEANEMLAG  60
   61 MEEELRYAPL SFRNPMTSKL RNYRKDLAKL HREVRSTPLT ATPGGRGDMK YDIYAVENEH 120
  121 MNRLQSQRAM LLQGPESLNR ATQSIERSHQ IATETDQIGS ETIEELGEQR DHLERTKSRL 180
  181 INTTENLSKS RKILHSMSRK ATTNKLLLSV IILLELAVLG GLVYYRFFRN H

Type	Start	End	Confidence
Cytoplasmic	1	205	0.84
Transmembrane Helix	206	225	0.95
Non-Cytoplasmic	226	231	0.68