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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28855193, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQPIRLKDH EKDARLVRGR VVFGAVAVVL LVCVLIARLY YLQVIQYDYH STLSENNRVH  60
   61 VQPIPPSRGL IYDRNGVVVA DNRPSFSLSM TRERSGEWSS VLDTIVEILQ LTPDDRIIFE 120
  121 KRMKQGRRPF EPVPILFELS EEQIALIAVN QFRLPGVEVV AQLVRHYPQG PHFAHSVGYM 180
  181 GRINEKELKS LDPINYSGTH HIGKTGIERF YEAELHGQVG YEEVETNARG RVLRVLKRTD 240
  241 PIPGKDIVLS LDINLQEAAE AALGGRRGAV VALDPSTGEV LAMVSAPSFD PNLFVTGISF 300
  301 KAYAELRDSI DRPLFNRILR GLYPPGSTIK PAVAIAGLDS GAVTPGSRVF DPGYYQLPNY 360
  361 DHKYRNWNRT GDGWVDLDTA IMRSNDTYFY DLAHKVGIDR LAAYMNKFGI GQKVSLDMFE 420
  421 ESPGLMPSRE WKRATRRQAW FPGETLILGI GQGYMQATPL QLAQATALVA NKGVWNRPHL 480
  481 ARTIEGKAPV DENPMPNIVL RDPANWGRVN HGMQEVMHGA RGTARKAAIG AQYRIAGKSG 540
  541 TAQVVAIKQG EKYDRTKVQE RHRDHALFVG FAPADNPKIV VAVMVENGES GSGVAAPVVR 600
  601 QVLDAWLLDE NGHLKPEYAG SLNLEAAARE E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle