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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|213925817, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWARPSMHS SAQRKLIMTR ILSIIGVSLC IAMLSPVLQA ANLKTLDVAA LPGDRIELKL  60
   61 AFDAPVPAPR GYTTAQPARI ALDLPGVTSQ LETKSRELGT GNARSVVVVQ AQDRTRVIIN 120
  121 LTTLAPYSSR VDGNNLFVVI GQGAAAAQAS QPTTAMGAQR VAVPPPAPAS ARPFIPAGVK 180
  181 AIRNVDFQRG ELGEGNVVID LSNPSIAPDI QEQGGKIRVD FAKTQLPEPL RVRLDVKDFA 240
  241 TPVQFVSASA TGDKASILIE PSGAFDYSAF QTENKLTISV RPLTNEDLDR RAADKPVYTG 300
  301 EKLSLNFQDI DVRSVLQLIA DFTNLNLVAS DTVQGGITLR LQNVPWDQAL DLVLKTKGLD 360
  361 KRKVGSVLLV APADEIAARE RQELESLKQI AELAPLRREL LQVNYAKAAD IAKLFQSVTS 420
  421 AESKAEERGS ITVDDRTNNI IAYQTQDRLD ELRRIVSQLD IPVRQVMIEA RIVEANVDYN 480
  481 KQLGVRWGGS TNTSRNGKWT TYGLDDNGDE GGNTNANLTS NIPFVDLGAA DATTGIGLGF 540
  541 VTNNTLLDLE LSAMEKTGNG EIVSQPKVVT SDKETAKILK GTEIPYQESS SSGATTVSFK 600
  601 EASLSLEVTP QITPDNRIIM EVKVTKDEPD YLNAVLGVPP IKKNEVNAKV LISDGETIVI 660
  661 GGVFSNTQSK VVDKVPFLGD VPYLGRLFRR DVVSESKSEL LVFLTPRIMN NQAISVSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle