YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113630967, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAAATSSS ASLRLLTKPP KPLLSKPHLL TLCAPVSFQR LVARSSASPT PSPSAAAAAA  60
   61 AASGSGVDPA QLPPALRDIV ALFQSVPDPR TRYKQLLAYA ARLPPMDPAL KTDANRVRGC 120
  121 VSQVWVHAAP EEGGAPGRVS FQADSDAQLT KGLAALLVLG LSGAPARDVA MVPVEFIELL 180
  181 GIRQSLSPSR NSGLLNMLSL MKRKALEVAT GEVTTEEIGS QEVVQEVAER PAAKEKEPEF 240
  241 AAFGAREEEG SEVHSPQEEQ LEEMPADVME GNGGLGGGRQ ERIKESLERG LSPVQLQIED 300
  301 ISHLHKGHAG VSGSNGETHF NVRVVSEAFQ GKSLLKRHRA VYDLLQDELK NGLHALSIDA 360
  361 KTPSEV

Type	Start	End	Confidence
Signal Peptide	1	47	0.94
N-region	1	38
H-region	39	44
C-region	45	47
Cleavage Site	47	48
Non-Cytoplasmic	48	366	0.99