YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|126511598, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFLSLLCPP VERAAVMRPP YTTHLQRVPL MRKSLLALSL LAATSAPVLA ADYSDGDIHK  60
   61 NDYKWMQFNL MGAFDELPGK SSHDYLEMEF GGRSGIFDLY GYVDVFNLAT NKSSDKVGDP 120
  121 KIFMKFAPRM SLDAFTGVDM SFGPVQEVYV ASLFEWDGTD FKTNAFSVNN QKIGLGSDVM 180
  181 VPWFGKVGLN LYGTYDGNRK DWNGFQISTN WFKPFYFFEN GSFISYQGYI DYQFGLKDEY 240
  241 STASNGGAMF NGIYWHSDRF AVGYGLKGYK DVYGIKDTDG FKSTGFGHYV AVTYKF

Type	Start	End	Confidence
Signal Peptide	1	50	0.99
N-region	1	41
H-region	42	47
C-region	48	50
Cleavage Site	50	51
Non-Cytoplasmic	51	296	0.99