YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|254226994, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYSPPKVSL VQVKHNGNPA TYRKFVMKKT VIGAIALMGA LAVTPVMAKE TISAVGSSSV  60
   61 TPLMEVFSET YAKMNPEVFI EVQGPGSSAG IKAAKNGSAD IGMSSRNLKD SEKEATLVEE 120
  121 AIALDGIAVV VHPSNAVKGL TAEQVSEIYK GEITNWKQVG GEDKPIVAIT RDTASGTRGA 180
  181 FEDIMELKKK VADKEVSAIS QRAQVANGNG ALKTMVASNP YAIGYISLGT VDTSVHALAV 240
  241 NGVEASVDNV KNGTYKVSRP FLVLYKQDKP SAEAKKFLDW MLSADAQKIV ADKGYITVN

Type	Start	End	Confidence
Signal Peptide	1	48	0.74
N-region	1	39
H-region	40	45
C-region	46	48
Cleavage Site	48	49
Non-Cytoplasmic	49	299	0.99