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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41052607, gi|...
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGHLDRLAR PCFEGSSSND DKRDHKSDVE NSEDDKRTRM GSLKKKAIDA STKIRHSLKK  60
   61 KKRRSGSRVL SVSIEDVRDL EELQAVEAFR QALILDELLP ARHDDYHMML RFLKARRFDI 120
  121 EKAKQMWTDM LKWRKEYGTD TIVEDFDYNE LDAVLQYYPH GYHGVDKDGR PVYIERLGKV 180
  181 DPNKLMHVTT MDRYVRYHVK EFERSFLIKF PACSLAAKRH IDSSTTILDV QGVGLKNFSK 240
  241 TARELIVRLQ KIDNDNYPET LYQMFIVNAG PGFRLLWNTV KSFLDPKTTS KIHVLGNKYQ 300
  301 SKLLEVIDAS ELPEFLGGAC TCPEYGGCLK AEKGPWKDQN ILNIVLSGEA QCARQIVTVS 360
  361 NGEEKIISYA KSKHHTIRGS DTSTAESGSE AEDVTSPKVL RSYISHPKLT PVREEVKMVR 420
  421 ATSFSTRMPE YDVPVVDKAV DATWKREVTR KTAFSSKDSS LTSTESSSNG SLDRIVAVLL 480
  481 AVFMAIITLV RSVKDLAAKR LPDKNESEQK YSTLYPDSMP KEEFRPPSPT PGFVEAELFS 540
  541 SVLQRLGDLE EKFLMLQDKP SEMPCEKEEL LNAAVRRVDA LEAELIVTKK ALHEALIRQE 600
  601 ELLAYIDSKE VAKAQKKKKA MFCY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle