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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34102933, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEHCDSSAW MKKPLLPASA TALLVLLLGA VLSLSLGWKV SRDNRERVDA ELRREARQLG  60
   61 VEVAARIRRY QNGLGGARGA IASNGEHGIN RQRFRVYTQS LNAAVEFPGL LGFGYARRVP 120
  121 PQRVAEFVRQ ERRDGEPGFS IRQLRPHEGE RAVIVYFEPE PGNRFVIGVD IASEPSRRAA 180
  181 AEAALRSGQA RLSEPIALMP HPEDKAQAFL LLLPVYAGGA TPASEEGRLR AGFGWVFAPI 240
  241 RAQDAMAGLM ADLPGVAVEL ADVTDGRKAV FFQGGSNPAQ PIAAASELQP LFGRDWRLSL 300
  301 RAGPAFADSL KLPSAALVAS SGLAASVLSA LLALVVGRNR QRRRELLAAQ SRLAAIVEGS 360
  361 VDAIISKTLD GVVTSWNLSA ERLFGYRADE AVGQPLAKLI VPEDRRGEEV DILRRIARGE 420
  421 RIEHFETVRM RKDGSLLIVS VSISPVLDEA GRVVGASKVL RDLSEQKRIK AELQVLSENL 480
  481 EQRVADRTAE LDQAWRTLQT VLDAVPFIIG YWDCDQINRV ANHAYRTWFG IDPGALPGMR 540
  541 MRDLLGEPLY QANLPHIEAV LGGEPQVFER QICGQDGVVR HSLTTYLPDL VNDEVRGFYA 600
  601 IVQDISEQVE SRSRLTSALK ERELLLDTIN QQLLYTATDT DGRILEANDL FCQVHGYERK 660
  661 ELLGWDHRKL SAGVHPAMFW QSLWRTIASG RVWRGEVCNQ TREGRQRWFD TVIVPHAGDS 720
  721 GRIERYIALR IDITERKLAD AELARVHGML SNVLRAASEV AIIAADVHGV VSLFNSGAQR 780
  781 MLGYSENEMV GRAMLTHFHL PEELREHGEA LSQRYERQVE GLRALVQEPE ASGAETREWT 840
  841 YVRKDGSQLQ VSLMVTAMRD ADELVVGYLA IAADITIPQR QQRELVAARD QLQLAAEVAQ 900
  901 LGVWSWSPAD NQLRWNAQMF EIYRQPPELA ERGLEYRHWR ERVHPDDVDS VEADLRALLE 960
  961 RGEAMDRVFR VRLPDGEMRY VQVGARLERH GDGVRVTGIN RDITETRAYE QNLLEAKRQA1020
 1021 EEASMVKSQF LANMSHEIRT PMNAVLGLLQ LMQHTRLDER QLDYVGKIQA AAKSLLGLLN1080
 1081 DILDFSKIDA GKLQLDLHPF DLEGLMRELA VVLSGNTNDK DVEVLFRMEP TLPAMLIGDK1140
 1141 LRLQQILINL AGNALKFTTQ GQVVLAVRER ARREGEVELR IEVSDTGIGI APEQLSRIFE1200
 1201 GFTQAEASTT RRFGGTGLGL VISRRLVELM GGQLRVESQL GCGSRFWFDL TLGMAADQPL1260
 1261 AQLPEPLGQL NVLVVDDNPL AGEILMDTIS TVGWRAEYAD GGEEALEKVH GAGSAGQRYD1320
 1321 VVLMDWRMPG LDGVGVAEVM RQQLAGDKPP VIIMVTAFGR EVLAEAAERP NPPFNDFLTK1380
 1381 PITPQQLVDA VVRSVTGEGE AERTPATTAF GRRLDGMSVL LVEDNALNRQ VASELLQEEG1440
 1441 ARVSLAEGGL SGVSQAVSAD PAFDIVIMDV QMPDIDGLEA TRRIRADMRC QRLPILAMTA1500
 1501 NASQADRAAC LAAGMNDHVG KPIDIDELVP KLLALAGREG GPDGTAASVP APRADDSGAL1560
 1561 VESLPSRLRR FGNKLRVYRA ALATFRPECE TLLSGIAESG RLDARPELAS GLHTLKGLAA1620
 1621 TLGAQALSRL AAELEKRARD GEAISGEDLE RLRGLLGDSV AQLFDSLPAE ETGKTAKPLP1680
 1681 DGDWRRQLRD ILALLEDSNL AAIDLVDELL DRPLGAQEDS VREVAACVQR LQFEQAIAIV1740
 1741 RELLALAD

YRC Informatics Platform - Version 3.0
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