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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34497659, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKRLAVAA MGLTMATVAM AADPFVIKDI RVEGLQRTEP GTVFNYLPVK VGDTFTDAKA  60
   61 KEAIKALFGT GFFNDVRVES RGDTLIVTVA ERPVITQLNI NGAKEFSKDQ LKKALKDNGF 120
  121 AESLIFDQAL LDGAVQELKR QYYSRGKYSV EITPTVTKLE RNRVAVTLDI NEGVTARIRE 180
  181 IRIVGANAFA QSKLLDEFSL TTGGWLSWIT KDDQYSKQKL TGDLEKLKAF YQNQGYMEFG 240
  241 IDSSQVSIGA DKKDMYLVIN VHEGKKYTVS DVRLAGDLKV PEAELMKLMQ VKRGDTFNNE 300
  301 KVTESVKALS DRLGNEGYAF ANVNVLPDID REKQTAAFTF FVDPGRKTYV RRVNVAGNSK 360
  361 TRDEVIRREL RQLEGAPYNA ANVKRSKERL ELLGYFEDVN VETPAVADAP DQVDMNIGLK 420
  421 ERSTGSISGS LGYVQGEGLV LGANISQSNI FGSGKYMSLG MSTGKVNKNY SLSFTDPYFT 480
  481 PDGVSLGYDL YNRVYNPDAT SISAYKTSTT GADMRFGVPI TEYDRINFTI GAEKTDITTY 540
  541 SNSPQQYIDF VKQYGNSNYT VLGTVGWGRD TRDSALWPTR GASIRVNADF GLPGGSLQYY 600
  601 SLTHQQTWFF PLSKDFTLML NGELGYADGY GKTKQLPFFK NFYMGGLGSV RGYDSSSIGP 660
  661 YDSVANSYLG GNRKAVANVE ILFPFPGMKD NKSLRTSLFF DAGTLWNTNL TAAEKAQGIT 720
  721 SSPSDGFRYS AGLALTWLSP MGPMKFSIAN PLKKEQGDKI QRFQFQLGTA F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle