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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113549997, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADLAVLQWW LGAMVAMAAA ASWSGGVLPA AEALGMNWGT QASHPLPPKI VAQLLQDNGI  60
   61 KKVKLFDADQ DTLSALAGTG IEVMVAIPNV MLDSITDYDT AKEWVRRNVS RYNFDGGVTI 120
  121 KYVAVGNEPF LAAYNGTFDK VTLPALMNIQ NALNDAGLGD SIKATVPLNA DVYDSPQDQQ 180
  181 VPSAGRFRAD IADLMTQMVQ FLANNSAPFT VNIYPFISLY LNDDFPVDFA FFDGGATPVV 240
  241 DNGISYTNVF DANFDTLVAA LKGVGHGDMP IVVGEVGWPT DGDKHATATY AQRFYNGLLK 300
  301 RLAANAGTPA RPGQYIEVYL FGLLDEDAKS VAPGDFERHW GILRFDGQPK YPVDLTGQGQ 360
  361 NTMLVPAKGV TYLPRTWCVI NTNAKDTSKL ADNINFACTF ADCTALGYGS TCAGMDANGN 420
  421 ASYAFNAYFQ VQNQKDDACD FQGLAMPTQT DPSTPACNFT IQIAATSAGH RRRAGAAVLA 480
  481 LLALFRLFLL H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle