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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50920483, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAATSTL LLLLLLLLLA TATHGAAADT VSSPASPEAA ALLNLSAALG DPSGYLSTHW  60
   61 THDTAFCSWP RLSCDADGSR VLSLDLSGLN LSGPIPAAAL SSLSHLQSLN LSNNILNSTF 120
  121 PEGLIASLKN LRVLDFYNNN LTGALPAALP NLTNLVHLHL GGNFFFGSIP RSYGQWSRIK 180
  181 YLALSGNELT GEIPPELGNL TTLRELYLGY FNSFTGGIPP ELGRLKELVR LDMANCGISG 240
  241 VVPPEVANLT SLDTLFLQIN ALSGRLPPEI GAMGALKSLD LSNNLFVGEI PASFASLKNL 300
  301 TLLNLFRNRL AGEIPEFVGD LPNLEVLQLW ENNFTGGVPA QLGVAATRLR IVDVSTNRLT 360
  361 GVLPTELCAG KRLETFIALG NSLFGSIPDG LAGCPSLTRL RLGENYLNGT IPAKMFTLQN 420
  421 LTQIELHDNL LSGELRLDAG VVSPSIGELS LYNNRLSGPV PVGIGGLVGL QKLLVAGNRL 480
  481 SGELPREIGK LQQLSKADLS GNLISGEIPP AIAGCRLLTF LDLSGNRLSG RIPPALAGLR 540
  541 ILNYLNLSHN ALDGEIPPAI AGMQSLTAVD FSDNNLSGEV PATGQFAYFN ATSFAGNPGL 600
  601 CGAFLSPCRS HGVATTSTFG SLSSASKLLL VLGLLALSIV FAGAAVLKAR SLKRSAEARA 660
  661 WRLTAFQRLD FAVDDVLDCL KEENVIGKGG SGIVYKGAMP GGAVVAVKRL PAMGRSGAAH 720
  721 DDYGFSAEIQ TLGRIRHRHI VRLLGFAANR ETNLLVYEYM PNGSLGEVLH GKKGGHLQWA 780
  781 TRYKIAVEAA KGLCYLHHDC SPPILHRDVK SNNILLDAEF EAHVADFGLA KFLRGNAGGS 840
  841 ECMSAIAGSY GYIAPEYAYT LKVDEKSDVY SFGVVLLELI AGRKPVGEFG DGVDIVHWVR 900
  901 MVTGSSKEGV TKIADPRLST VPLHELTHVF YVAMLCVAEQ SVERPTMREV VQILTDLPGT 960
  961 AAATAMDAPS HGSGKEQDRS AEMQQQDGSR ESPPQQDLLS I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle