YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108708709, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAAGGGD GRWCVVTGGR GFAARHLVAM LLRSGEWLVR VADLPPAIAL DRDEEEGILG  60
   61 AALREGRAAY ASADLRNKAQ VAAAFEGADV VFHMAAPDSS INNFHLHYSV NVEGTKNVID 120
  121 ACIRCKVKRL IYTSSPSVVF DGIHGIFDAD ESMPYPDKFN DSYSETKADA EKLVMKANGR 180
  181 DGLLTCCIRP SSIFGPGDKL LVPSLVTAAR AGKSKYIIGD GSNYYDFTYV ENVAYGHVCA 240
  241 EKTLSSEDGA KRAAGKTYFI TNMEAIKFWE FMSLILEGLG YERPSIKIPV SVMMPVAHMV 300
  301 EWTYKTFARY GMKIPQLTPS RIRLLSCNRT FSCSRAKDQL GYEPIVSLKD GLKRTIESYP 360
  361 HLQAQNQRSI SKASIFLGNG NLAKTVLWED MKQTMTVLLL LAVIYYHLFT CGYTFITAMA 420
  421 KLFSLTALFL FIHGILPANV FGHKVEKLEP SNFHITQVEA HHIAHSVSST WNSLVGVLKS 480
  481 LCRGNDWPLF FKVVFSLLVV SILSSMSSQS AFKIGISMAF LGFKAYEKWE DTIDDLVGNA 540
  541 CSVVTHFVQG QKSSRQKHAD N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle