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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50944497, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSLAVASPH PAAAFAAARP RRGPRPAAAP SHRGVNPQRW RCEKTQAWSF WSSLWASDLP  60
   61 GGLYGDVSKN MLKPAAAVSV EQAEASAHLP KGDMWSVHKF GGTCMGTSQR IQNVADIILR 120
  121 DPSERKLVVV SAMSKVTDMM YNLVNKAQSR DDSYITALDE VFEKHMAAAK DLLGGEDLAR 180
  181 FLSQLHADVS NLKAMLRAIC IAGHATESFS DFVVGHGEIW SAQLLSFAIK KSGTPCSWMD 240
  241 TREVLVVNPT GSNQVDPDYL ESEKRLEKWF ARQPAETIIA TGFIASTPEN IPTTLKRDGS 300
  301 DFSAAIIGSL VKAGQVTIWT DVDGVFSADP RKVSEAVILS TLSYQEAWEM SYFGANVLHP 360
  361 RTIIPVMKYN IPIVIRNMFN ISAPGTMICQ QPANESGDLE ACVKAFATID KLSLVNVEGT 420
  421 GMAGVPGTAS AIFGAVKDVG ANVIMISQAS SEHSVCFAVP EKEVAAVSAA LHVRFREALS 480
  481 AGRLSKVEVI HNCSILAAVG LKMASTPGVS ATLFDALAKA NINVRAIAQG CSEYNITVVL 540
  541 KQEDCVRALR AAHSRFFLSK TTLAVGIIGP GLIGRTLLNQ LKDQAAVLKE NMNIDLRVMG 600
  601 ITGSRTMVLS DTGIDLAHWK EQLQTEAEPA NLDKFVDHLS ENQLFPNRVL VDCTADTSVA 660
  661 SHYYDWLKKG IHVITPNKKA NSGPLDKYLK LRTLQRASYT HYFYEATVGA GLPIISTLRG 720
  721 LLETGDKILR IEGIFSGTLS YIFNNFEGTR AFSDVVSEAK EAGYTEPDPR DDLSGTDVAR 780
  781 KVLLPS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle