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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCMC2_XENLA
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPRSLVSP LLSGVFCQCD TVSGAPHSHE TPASPSLAAA ALAADPCGGL LCGGPEHERR  60
   61 LQILFQELDV NKDGAICIND LAVGLKRLGV HRTELELRKI VKAGDKDQDG QLDFDEFVHY 120
  121 LRDHEKKLRL VFKSLDKKND GRIDAQEIMQ SLRDLGVNIS EQQAEKILKS MDKNGTMTID 180
  181 WNEWRDYHLL HSAENIPEII LYWKHSTIFD VGENLLVPDE FTVEEKQTGM WWRHLVAGGG 240
  241 AGAVSRTCTA PLDRLKVLMQ VHASRSNNMS ILGGFTHMIR EGGFRSLWRG NGINVIKIAP 300
  301 ESAIKFMAYE QIKRIIGSNQ ETLGIHERFV AGSLAGVIAQ SSIYPMEVLK TRMALRKTGQ 360
  361 YQGVLDCGKK ILLQEGLSAF YKGYVPNMLG IIPYAGIDLA VYETLKNAWL QRYATSSADP 420
  421 GVFVLLACGT VSSTCGQLAS YPLALVRTRM QAEASVEGAP QMTMSKLFKH IVKTEGAFGL 480
  481 YRGLAPNFMK VIPAVSISYV VYENLKLTLG VQSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle