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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16262534, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSGIANLAY VSIPMFVLMG AAVASSPAGS DLYTSLDRWL NRIPGGLILS NIGACAIFSG  60
   61 MTGSSPATCA AIGKMGIPEM MRRGYPASVA SGSIAAGGTL GILIPPSVTL IVYGIATETS 120
  121 IGRLFMAGIL PGILLTIMFM TWAVIDCKRK GYEFEARLVR YSMKERLAVL PRILPFLLII 180
  181 AGTLYVLYGG IATPSEAAGA GAFLTLAVVI VAYRLFRFRP VAGIFGSAMK ESVMIMMIMA 240
  241 AAELFAFALS SLFITQTVAA AIADMEVNRW VLMAVINVFL LICGMFLPPV AVIVMTSPML 300
  301 FPIVTQAGFD PYWFAIVLTI NMEVGLITPP IGLNLFVINA IAPQIPTKDI LWGSLPYVLV 360
  361 MFLAIILLCV FPDVATWLPN QMLGDRPMNT TSFFSDMLQS IAERGRRFLS LGPARNGDVN 420
  421 PVGTMEALCD TLLSSRGEAS GMALAKNILD RWQGFDQDKR RDFMLALLSR FGPDIERLER 480
  481 AIDAYRADPT PKALLEMSMA AEPRRQELIR RLNLAPNGIA TLVRMRADLL ELKAQNPDLE 540
  541 AVDTDFAHLF GSWFNRGFLV LRPISWSTPA DILEKIIRYE AVHHIGGWDE LRRRLAPEDR 600
  601 RCFAFFHPQL VDDPLIFVEV ALTREMPPNI ADLLKEDRAP IRATDATTAV FYSISNCQEG 660
  661 LRGISFGNFL IKQVVEDLRR DLPRLDTFVT LSPVPGFADW LSRERQAETS NALSAADRSR 720
  721 LAALDEPDWA DQPEIAAAIQ PSLTAAAAWY FLRARNRNGK TVDPVARFHL GNGARLERIN 780
  781 FLGDRSERAM RQAHGLMVNY LYKLDDIETN HEAFATRGEV VAAPAIRRLI PADRSSRSLV 840
  841 PGPNVFPPGV RSADAPGRKG DKEFTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle