YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|10172851, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKWLKGGVF ALGLVALLFI IQYQFISNDS SSTWNLPLSG KVIILDPGHG GIDGGATSRA  60
   61 GALEKDITLA VSLELRDYLQ EAGALVLMTR EEDRDLADAT TAKVRQRKVQ DLKRRVEIVN 120
  121 GSGADMFVSI HLNAIASPRW SGAQTFYNRA IPENEPLARF VQDQLKRNLE NTSRYAKPIN 180
  181 NVFLLKHAEI PGLLVEAGFL SNPSEAELLE TEDYQQKVAA SIYQGIMRYY TNEDAPEQ

Type	Start	End	Confidence
Cytoplasmic	1	6	0.72
Transmembrane Helix	7	26	0.74
Non-Cytoplasmic	27	238	0.98