YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25328855
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEETISLKEM FQTIMRRLKL IIALPVLAVC LAGFVSFFLL TPIYQSSTQI LVNHSNDNQS  60
   61 FNSQDIRTNI DLINTYSVII KSPAILDKVI DNLQLEDTYS QLNERLQINS ENNSQVVNIT 120
  121 VKHEKPAMAV AIANEIALVF QNEIVEIMNV DNVSILSTAE LGESPSPVSP NPMLNMAIAF 180
  181 VVGLMGAVGI AFLLDYLDTT IKDEKEVEDV LELPVLGVIP NFEKSEEKKL IV

Type	Start	End	Confidence
Cytoplasmic	1	19	0.97
Transmembrane Helix	20	41	0.95
Non-Cytoplasmic	42	173	0.98
Transmembrane Helix	174	196	0.85
Cytoplasmic	197	232	0.92