YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|213650462
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEDIFDAII VGAGLAGSVA ALVLAREGAQ VLVIERGNSA GAKNVTGGRL YAHSLERIIP  60
   61 GFADQAPIER MITHEKLAFM TDNGAMTIDY CNGEDASASQ VSYSVLRSKF DAWLMEQAEE 120
  121 AGAQLITGIR VDNVVQRDGK VVGVEADGDI LEAKVVILAD GVNSLLAEKL GMAKRVEASH 180
  181 VAVGVKELIE LPKSVIEDRF QLQGNEGAAC LFAGAPTDGL MGGGFLYTNE TTLSLGLVCG 240
  241 LHHLKDAKKS VPQMLEDFKQ HPAVAPLIAG GKLVEYAAHV VPEAGMNMQP ELVGDGVLIA 300
  301 GDAAGMCMNL GFTIRGMDLA ISAGEAAAKT VLSAMKRDDF SKQSLGEYRQ HLDEGPMRDM 360
  361 RMYQKLPAFL DNPRMFTAYP EMAVSIARDL FTVDGSAPVP MRKKILRHAK KVGFINLMKD 420
  421 GLKGVTVL

Type	Start	End	Confidence
Signal Peptide	1	25	0.49
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	428	0.94