YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56128195, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKWLVVIMA FWLASCSSGG ENKSYYQLPI AQSGVQSTAS QGNRLLWVEQ VSVPDYLAGN  60
   61 GVVYQTSDVQ YVIANNNLWA SPLDQQLRNT LVANLSARLP GWVVASQPLG TTQDTLNVTV 120
  121 TGFHGRYDGK VIVSGEWLLN HNGQLIKRPF HIEASQQKDG YDEMVKVLAS AWSQEAAAIA 180
  181 DEIKRLP

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	187	0.99