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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29141941, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIISVRQRL YPALLLPLTF SPVLQAASAP NEQTMIVTAT PQTVSELDTP AAVSVIEGED  60
   61 MRLATPRVNL SESLTSVPGL QVQNRQNYAQ DLQISIRGFG SRSAFGVRGI RLYVDGIPAT 120
  121 MPDGQGQISN IDINSIQNVE VLRGPFSALY GNASGGVINV TTETGRQPPT LEASSYYGSY 180
  181 GSWRYGLKAT GAMGDGTQPG DVDYTVSTTR FTTHGYRDHS GARKNLANAK LGVRLDDVSK 240
  241 LSLIFNSVDI KADDPGGLTE SEWKADPQQA PRAEQYNTRK TIKQTQAGLR YERQLSAQDD 300
  301 ISVMAYAGER ETTQYQSIPL VAQLKPAQAG GVITLQRHYQ GIDSRWTHRG ELGVPVTFTG 360
  361 GLNYENMSEN RKGYNNFRLN NGTPEFGHKG DLRRDERNLM WNVDPYLQTQ WQLTQKLSLD 420
  421 AGVRYSSVWF DSNDHYIAPG NGDDSGDASY HHWLPAGSLK YALTDAWNLY LAAGRGFETP 480
  481 TINELSYRAD GQSGFNFDLK PSTNDTVEVG SKTRIGNGLL TAALFQTDTD DEIVVASSMG 540
  541 GRTTYKNAGK TRRQGAELAL DQRFAGDWRV KASWTWLDAT YRSNVCQGQN CDGNRMPGIA 600
  601 RNMGFASLGF IPDEGWYAGT DVRYMGDIMA NDENTAKAPS YTVVGLNTGY KFNYSQLTVD 660
  661 IFGRVDNLFD EEYIGSVIVN ESNGRYYEPA PGRNYGVGIN LAWQFE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle