YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|213581021
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMSTSTEVI AHHWAFAIFL IVAIGLCCLM LVGGWFLGGR ARARHKNVPF ESGIDSVGTA  60
   61 RLRLSAKFYL VAMFFVIFDV EALYLFAWST SIRESGWVGF VEAAIFIFVL LAGLVYLARI 120
  121 GALDWTPARS RRERMNPETN SIANRQR

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.94
Transmembrane Helix	14	37	0.93
Cytoplasmic	38	67	0.94
Transmembrane Helix	68	88	0.94
Non-Cytoplasmic	89	99	0.83
Transmembrane Helix	100	123	0.87
Cytoplasmic	124	147	0.97