YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16504483, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPLVRGVAY CHANDVTQHM DVKLMLSVFI PSSERCVSRC RYLLSFALIN IIFSILVGVL  60
   61 LYLSFVILAI LFTILLHYLV INLNCQRFRD SGFEYIKFYV WGTLVIYIAS FVIMVAEDFA 120
  121 CDGFGMPLFL IWYFATFSLL LLAPPDSNSL NK

Type	Start	End	Confidence
Cytoplasmic	1	39	0.90
Transmembrane Helix	40	61	0.82
Non-Cytoplasmic	62	64	0.52
Transmembrane Helix	65	85	0.83
Cytoplasmic	86	94	0.84
Transmembrane Helix	95	116	0.90
Non-Cytoplasmic	117	123	0.73
Transmembrane Helix	124	143	0.91
Cytoplasmic	144	152	0.74