YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|213028554
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLELLYTALL YLIQPLIWIR LWVRGRKAPA YRKRWGERYG FYRRPLKPGG IMLHSVSVGE  60
   61 TLAAIPLVRA LRHRYPDLPI TVTTMTPTGS ERVQSAFGND VQHVYLPYDL PDALNRFLNK 120
  121 IDPKLVLIME TELWPNLIAA LHKRHIPLVI ANARLSARSA AGYAKLGKFV RTLLRRITLI 180
  181 AAQNEEDGER FVALGAKNNQ VTVTGSLKFD ISVTPQLAAK AVTLRSQWAP HRPVWIATST 240
  241 HDGEESIVIA AHQALLHQFP NLLLILVPRH PERFPDAINL VRQAGLSYIT RSSGEVPSAS 300
  301 TQVVVGDTMG ELMLLYGIAD LAFVGGSLVE RGGHNPLEAA AHAIPVLMGP HTFNFKDICA 360
  361 RLEQASGLIT ITDAATLAKE VSSLLTDADY RNFYGRHAVE VLYQNQGALQ RLLQLLEPYL 420
  421 PPKTH

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.78
Transmembrane Helix	7	24	0.65
Cytoplasmic	25	44	0.69
Transmembrane Helix	45	65	0.52
Non-Cytoplasmic	66	425	0.87