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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|188024499, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLNGKFPVK FVKYFLILAV CCILLGAGSI YGLYRYIEPQ LPDVATLKDV RLQIPMQIYS  60
   61 ADGELIAQYG EKRRIPVTLD QIPPEMVKAF IATEDSRFYE HHGVDPVGIF RAASVALFSG 120
  121 HASQGASTIT QQLARNFFLS PERTLMRKIK EVFLAIRIEQ LLTKDEILEL YLNKIYLGYR 180
  181 AYGVGAAAQV YFGKTVDQLT LNEMAVIAGL PKAPSTFNPL YSMDRAVARR NVVLSRMLDE 240
  241 GYITQQQFDQ TRTEAINANY HAPEIAFSAP YLSEMVRQEM YNRYGESAYE DGYRIYTTIT 300
  301 RKVQQAAQQA VRNNVLDYDM RHGYRGPANV LWKVGESAWD NNKITDTLKA LPTYGPLLPA 360
  361 AVTSANPQEA TAMLADGSTV ALSMEGVRWA RPYRSDTQQG PTPRKVTDVL QTGQQIWVRQ 420
  421 VGDAWWLAQV PEVNSALVSI NPQNGAVMAL VGGFDFNQSK FNRATQALRQ VGSNIKPFLY 480
  481 TAAMDKGLTL ASMLNDVPIS RWDAGAGSDW QPKNSPPQYA GPIRLRQGLG QSKNVVMVRA 540
  541 MRAMGVDYAA EYLQRFGFPA QNIVHTESLA LGSASFTPMQ VARGYAVMAN GGFLVDPWFI 600
  601 SKIENDQGGV IFEAKPKVAC PECDIPVIYG DTQKSNVLEN NDVEDVAISR EQQNVSVPMP 660
  661 QLEQANQALV AKTGAQEYAP HVINTPLAFL IKSALNTNIF GEPGWQGTGW RAGRDLQRRD 720
  721 IGGKTGTTNS SKDAWFSGYG PGVVTSVWIG FDDHRRNLGH TTASGAIKDQ ISGYEGGAKS 780
  781 AQPAWDAYMK AVLEGVPEQP LTPPPGIVTV NIDRSTGQLA NGGNSREEYF IEGTQPTQQA 840
  841 VHEVGTTIID NGEAQELF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle