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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|229690391, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFVKYFLIL AVCCILLGAA SIFGLYKYIE PQLPDVATLK DIRLQTPMQV YSAEGELIAQ  60
   61 FGEKRRIPLT LNQIPPEMVH AFIATEDSRF YDHHGVDPVG ILRAVSIAML SGRASQGAST 120
  121 ITQQLARNFF LSPERTLMRK IKEAFLAIRI EQMLTKDEIL ELYLNKIYLG YRAYGVGAAA 180
  181 QVYFGKEVHE LTLSQIAMIA GLPKAPSTFN PLYSHDRAVA RRNVVLLRML DEKYITQAQY 240
  241 DQARSEELVA NYHVPQIAFS APYLAEMVRQ EMIKRYGENA YTDGYQVYTT ITRKLQLAAV 300
  301 DSLRANVLAY DMRHGYRGPS NVLWKVGESA WSREQIIDSL KALPVYGPLL PAVVTEADAA 360
  361 QATAMLADGS NVTLPMVGIR WARPFKSDNA QGPVPKKATD VVQPGQQIWV RKVDDNWWLA 420
  421 QVPDVNSALV SIDPNNGAIK ALVGGFDFNQ SKFNRATQAL RQVGSNIKPF LYTAAMDKGL 480
  481 TLATILNDLP ITRWDSGAGT DWRPKNSPPT YDGPIRLRQG LGQSKNVVMV RAMRAMGVDY 540
  541 AAEYLQRFGF PAQNIVHSES LALGSASFTP LQLVRGYAVL ANGGYLVDPY FITKITDDVG 600
  601 NVLFETKPKV VCDNCNLPVI YGDTQRSVVL SDDNIENVAT SQNQNASNVP MPELEQVTPA 660
  661 QTTLNSEQQY APHVISTPLA FLMRDALNSN IFGEPGWMGT GWRAGRDLKR KDIGGKTGTT 720
  721 NSSKDAWFSG YGPDTVTSVW IGFDDHRRNL GRSTASGAIP DQISGAEGGA KTAQPAWNDF 780
  781 MKVALEGLPE KQVPPPPGIV SVVIDKQTGK LSNGGPGSRS EYFIDGTQPT EHTVHEVGTT 840
  841 LMDNGQTHEL F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle