YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149364916, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKIALLFAM IICLPAASFT SSASEPVAVS KELKQQLLGS SVYIQIFKEE RVLELYAKLQ  60
   61 GEYRLVQSYP ICEFSGGLGP KRREGDFKSP EGFYRINTRH LKPDSQFYRA INIGFPNDYD 120
  121 KSQGYSGKYL MIHGACKSIG CYAMTDAYMD EIFNYVRTAF IFGQEKVDIS IYPFRMTEQN 180
  181 IQRHRNSSYS NFWRQLQPGY TYFAKNRMPP PVSVSNGQYV LSPPPLTSTP TSQLALIKTD 240
  241 PLTKTE

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	246	0.99