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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NAC74_ORYSA
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLRDMVLP PGFGFHPKDT ELISHYLKKK IHGQKIEYEI IPEVDIYKHE PWDLPAKCDV  60
   61 PTQDNKWHFF AARDRKYPNG SRSNRATVAG YWKSTGKDRA IKMGKQTIGT KKTLVFHEGR 120
  121 PPTGRRTEWI MHEYYIDERE CQACPDMKDA YVLCRITKRN DWIPGNGNEL DNSDPHPEPY 180
  181 DAPPSVISTE QLNPAAEPVV GVEAAPVTVA EPDGVTTSAI TANIPSPSDD INLDDWLNEL 240
  241 FDPFFDPEQS LASADLSPDE QNVESSNVGA LAPKVEQDYS SPNENVVDDT EYLLPEDVYN 300
  301 ILHPGTDDFN MLQNPLDQYP IQYATDVWSG IQKEELWSPQ ANAEPSQSNE AADNGIIRRY 360
  361 RSMKTPETSV PQFKGKTQAK MRVGINKMAT SSSESINQTI KFENSGRLVE HQKNQAHDVA 420
  421 STKRSDAGKP STELSSNRGF LRGIRNAFAG CSDARWNMIL VAGFAIGVAV VALHIGQRLG 480
  481 LSQRDQQHT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle