YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7494382
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKISFLFKLV CIYIVIIFLF QDVRCIKTKK IVRCFNPFVR TKTIKKKVQP NFLKRVALNL  60
   61 KIPQTINLIR GKYNLLHEIY VNKKKHIFNV IYKDIISNNK KRFLNMLKNI VKKQRSINIP 120
  121 LFFNKTMHSF HSNFIYYYTY FYILRTDLYL RTLKKFHNVL IGKFKINILS KVINSLSAFD 180
  181 KMFLWNDGRI SKILHKYILK CERKLNRVAD ECFLNSPLCN NNTSPVKRKK RTWFCSNDNV 240
  241 ITYNDFNDQV ETKKEKFYIS AFKVLPLFFY NVFNINFYLK TIKKIRNSIN TNIRLYLLKD 300
  301 YINDQDSIKA IFYTYKTFFQ LSLEKNIVSL FRVFQDKMSI EQKFETTLIN NMEKQLKIKL 360
  361 PNIGLTNITN LSLILFKLFA NKITQVVFYL ILVYIKQFLY ARRKFLKDIY SFPFY

Type	Start	End	Confidence
Signal Peptide	1	25	0.86
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	415	0.94