YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3845205, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFLFLCIII NTLVFLWFVI NIFLKSSNTY KDKGRNEMVE MGVVLGSGGH TYEMIQILKQ  60
   61 IKNSNILFNF FYSHNDNLSK IKTENELVNY QKNFFVIPRC RNVGDSYSLS FIKFIFSFLY 120
  121 CIFLTYKMKN MKVIMVNGPG VCVPLVYSLI FRKYIFLKNI KIVYIESICR VYSLSLSAKL 180
  181 LYYFADLFVV FSEHLKKKYK KAKYYGYFF

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.83
Transmembrane Helix	5	25	0.88
Cytoplasmic	26	108	0.86
Transmembrane Helix	109	126	0.85
Non-Cytoplasmic	127	132	0.70
Transmembrane Helix	133	151	0.84
Cytoplasmic	152	209	0.71